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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_13780Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1103 aa)    
Predicted Functional Partners:
EH31_02695
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
EH31_06230
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
EH31_14915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
EH31_15475
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.736
EH31_08105
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
    
 
 0.730
EH31_13775
Twin-arginine translocation pathway signal; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
EH31_09080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.622
EH31_05025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.621
pal
Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  0.621
EH31_12860
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.621
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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