STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_14405Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. (505 aa)    
Predicted Functional Partners:
EH31_02695
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.910
EH31_06230
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.910
EH31_09050
Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.
   
 0.843
EH31_04510
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.709
EH31_09395
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.678
EH31_14410
Membrane protease subunit HflC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.641
EH31_14415
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.641
EH31_08105
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
    
 
 0.631
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.606
EH31_14420
Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
     0.569
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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