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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_14535Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)    
Predicted Functional Partners:
EH31_15705
Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.725
EH31_05145
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.556
EH31_12585
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
  
  0.553
EH31_01200
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.547
EH31_05620
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.529
EH31_12885
Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.
    
  0.516
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
  0.497
EH31_08220
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.483
EH31_13605
Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.477
sseA
3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.475
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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