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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_15580Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)    
Predicted Functional Partners:
EH31_15575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
EH31_15845
Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
EH31_04335
Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.643
EH31_10005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
EH31_01740
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
EH31_15570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
EH31_03195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
EH31_07080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
EH31_09060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
EH31_15530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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