STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_16240Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)    
Predicted Functional Partners:
EH31_16235
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.966
EH31_16250
RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.966
EH31_16245
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.965
EH31_16255
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
EH31_16225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.674
EH31_16230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.674
EH31_16220
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
nnrE
Sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of [...]
     
 0.448
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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