STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_06349JmjC domain-containing histone demethylation protein 1D. (927 aa)    
Predicted Functional Partners:
EAG_09814
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.842
EAG_09813
Histone H3; Belongs to the histone H3 family.
    
 0.722
EAG_08793
Histone domain-containing protein.
    
 0.722
EAG_04212
Histone H3; Belongs to the histone H3 family.
    
 0.722
EAG_04213
Histone H3; Belongs to the histone H3 family.
    
 0.722
EAG_09561
Histone demethylase UTX.
   
 0.660
EAG_02534
E3 ubiquitin-protein ligase RING2.
    
 
 0.652
EAG_04761
Histone-lysine N-methyltransferase SETD1B.
   
 
 0.628
EAG_12168
Histone demethylase JARID1A.
    
 0.601
EAG_03734
AT-rich interactive domain-containing protein 5B.
     
 0.586
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.