STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_14117Transcription elongation factor SPT4. (59 aa)    
Predicted Functional Partners:
EAG_13513
Transcription elongation factor SPT5.
    
 0.999
EAG_12998
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.998
EAG_10308
DNA-directed RNA polymerase II subunit RPB3.
   
 0.998
EAG_14021
DNA-directed RNA polymerase II subunit RPB7.
   
 0.997
EAG_13814
DNA-directed RNA polymerase II subunit RPB11.
   
 0.996
EAG_01239
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.996
EAG_03396
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.995
EAG_14451
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.994
EAG_15578
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.990
EAG_11305
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
    
 0.984
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
Server load: low (26%) [HD]