STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_08449CCR4-NOT transcription complex subunit 6. (171 aa)    
Predicted Functional Partners:
EAG_08457
CCR4-NOT transcription complex subunit 6.
 
      0.900
EAG_08458
CCR4-NOT transcription complex subunit 6-like-B.
 
      0.900
EAG_04679
CCR4-NOT transcription complex subunit 1.
    
 0.779
EAG_03626
CCR4-NOT transcription complex subunit 7.
    
 0.778
EAG_12428
Cell differentiation protein RCD1-like protein.
    
 0.736
EAG_02114
CCR4-NOT transcription complex subunit 2.
    
 0.730
EAG_03448
CCR4-NOT transcription complex subunit 4.
    
 0.729
EAG_12112
CCR4-NOT transcription complex subunit 3.
    
 0.728
EAG_05866
Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
    
 0.637
EAG_03871
Protein PAT1-like protein 1.
    
 
 0.617
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.