STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_11230NF-X1-type zinc finger protein NFXL1. (837 aa)    
Predicted Functional Partners:
EAG_16081
Peptidylprolyl isomerase.
    
 
 0.680
EAG_06917
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.617
EAG_03078
UV excision repair protein RAD23-like protein B.
   
   0.572
EAG_04332
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.541
EAG_09680
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.541
EAG_12145
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.541
EAG_15838
60S ribosomal protein L7a.
    
 
 0.539
EAG_04215
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.538
EAG_01593
60S ribosomal protein L5.
    
   0.533
EAG_02521
RAD50-interacting protein 1.
   
    0.530
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.