STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_12849Vesicular integral-membrane protein VIP36. (173 aa)    
Predicted Functional Partners:
EAG_05897
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.696
EAG_01703
Transmembrane emp24 domain-containing protein.
   
 0.617
EAG_15610
BET1-like protein.
   
 
 0.615
EAG_01669
Transmembrane emp24 domain-containing protein 10.
   
 0.610
EAG_12669
Protein ERGIC-53.
    
0.587
EAG_10687
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.580
EAG_10298
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 
 0.576
EAG_16316
Golgin subfamily A member 2.
     
 0.575
EAG_04273
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.569
EAG_02060
Protein transport protein Sec24B.
    
 0.562
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.