STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_02508Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)    
Predicted Functional Partners:
EAG_09996
U3 small nucleolar RNA-interacting protein 2.
   
 0.999
EAG_04508
rRNA 2'-O-methyltransferase fibrillarin.
   
 0.999
EAG_02741
U3 small nucleolar RNA-associated protein 15-like protein.
   
 0.999
EAG_04999
Nucleolar protein 5A.
   
 0.999
EAG_04350
Nucleolar protein 5.
   
 0.999
EAG_04328
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.997
EAG_04900
Cirhin.
   
 0.996
EAG_01105
U4/U6 small nuclear ribonucleoprotein Prp3.
    
 0.994
EAG_04068
U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.994
EAG_05643
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 0.993
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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