STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_06643Transmembrane and TPR repeat-containing protein 4. (485 aa)    
Predicted Functional Partners:
EAG_02727
Uncharacterized protein C12orf11.
    
 0.729
EAG_12151
Integrator complex subunit 1.
    
 0.713
EAG_06193
Integrator complex subunit 10.
    
 0.631
EAG_05365
Integrator complex subunit 3.
    
 0.576
EAG_03492
Integrator complex subunit 6-A.
    
 0.566
EAG_09564
Integrator complex subunit 9.
  
 0.558
EAG_02932
Integrator complex subunit 11.
   
 0.552
EAG_16132
Protein PTHB1.
    
 0.522
EAG_07791
Parafibromin.
    
 0.492
EAG_01921
Bardet-Biedl syndrome 7 protein.
    
 0.486
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.