STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_06629Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (787 aa)    
Predicted Functional Partners:
EAG_14879
Glycosyltransferase 25 family member.
   
0.799
EAG_07713
Prolyl 4-hydroxylase subunit alpha-2.
   
  
 0.567
EAG_10861
Uncharacterized protein C16orf52-like protein A.
   
 0.545
EAG_14877
Glycosyltransferase 25 family member.
   
 0.545
EAG_03780
Collagen alpha-1(IV) chain.
   
 0.496
EAG_04651
Division abnormally delayed protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.483
EAG_06631
RNA 3'-terminal phosphate cyclase.
 
      0.430
EAG_00555
RNA 3'-terminal phosphate cyclase.
 
      0.428
EAG_06143
Collagen alpha-1(IX) chain.
   
 0.426
EAG_11303
Prolyl 3-hydroxylase 1.
   
 
 0.424
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.