STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01502Probable methyltransferase TARBP1. (325 aa)    
Predicted Functional Partners:
EAG_08514
Superkiller viralicidic activity 2-like 2.
   
    0.869
EAG_07248
39S ribosomal protein L47, mitochondrial.
   
 
 0.800
EAG_02818
Uncharacterized protein C7orf30.
   
 
 0.799
EAG_02350
tRNA modification GTPase GTPBP3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
 
 0.779
EAG_15680
Protein RRP5-like protein.
  
    0.775
EAG_13198
Small subunit processome component 20-like protein.
   
    0.766
EAG_04476
39S ribosomal protein L17, mitochondrial.
  
 
 0.765
EAG_07961
WD repeat-containing protein SAZD.
   
    0.759
EAG_04900
Cirhin.
   
    0.759
EAG_02346
Pseudouridylate synthase 7-like protein.
   
   0.758
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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