STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_04521Protein DGCR14-like protein. (850 aa)    
Predicted Functional Partners:
EAG_12219
UPF0549 protein C20orf43-like protein.
      
 0.514
EAG_16091
Integral membrane protein DGCR2/IDD.
      
 0.510
EAG_14657
Protein crooked neck.
      
 0.507
EAG_04289
Pre-mRNA-processing factor 19.
    
 
 0.494
MED15
Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.448
EAG_10219
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 
 0.438
EAG_04110
Protein BUD31-like protein.
      
 0.437
EAG_13963
Gastrulation defective protein 1-like protein.
      
 0.434
EAG_09187
Pre-mRNA-processing-splicing factor 8.
      
 0.433
EAG_04485
39S ribosomal protein L40, mitochondrial.
   
  
 0.429
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.