STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_02269WD repeat-containing protein 43. (627 aa)    
Predicted Functional Partners:
EAG_02904
U3 small nucleolar ribonucleoprotein protein IMP4.
   
  0.999
EAG_13296
WD repeat-containing protein 46.
   
 0.999
EAG_02484
U3 small nucleolar RNA-associated protein 18-like protein.
   
 0.999
EAG_11544
U3 small nucleolar RNA-associated protein 6-like protein.
   
 0.999
EAG_15555
WD repeat-containing protein 36.
   
 0.999
EAG_08856
Nucleolar protein 14-like protein.
   
 0.999
EAG_02741
U3 small nucleolar RNA-associated protein 15-like protein.
   
 0.999
EAG_15367
Periodic tryptophan protein 2-like protein.
   
 0.999
EAG_01824
Ribosome biogenesis protein BMS1-like protein.
   
 0.999
EAG_09002
HEAT repeat-containing protein 1.
   
 0.999
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.