STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10397Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (310 aa)    
Predicted Functional Partners:
EAG_02871
Histone H2A; Belongs to the histone H2A family.
   
 
 0.873
EAG_09814
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.848
EAG_10396
Fibrillin-2.
 
  
   0.839
EAG_15397
Histone chaperone asf1.
   
 
 0.819
EAG_02955
Nuclear pore complex protein Nup214.
     
 0.694
EAG_02732
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
 
0.693
EAG_02859
Protein TKR.
   
 0.662
EAG_02860
Acidic leucine-rich nuclear phosphoprotein 32 family member A.
   
 0.662
EAG_09817
Histone H2B; Belongs to the histone H2B family.
    
 
 0.554
EAG_09815
Histone H2B; Belongs to the histone H2B family.
    
 
 0.554
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.