STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10408Eukaryotic translation initiation factor 4E transporter. (1256 aa)    
Predicted Functional Partners:
EAG_05866
Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
   
 0.985
EAG_02550
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.976
EAG_04717
LSM14 protein-like protein A.
   
 
 0.957
EAG_04679
CCR4-NOT transcription complex subunit 1.
   
 
 0.729
EAG_05529
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.719
EAG_09814
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.694
EAG_09451
Tudor domain-containing protein PHF20L1.
    
 0.674
EAG_05246
Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.657
EAG_10308
DNA-directed RNA polymerase II subunit RPB3.
   
 0.629
EAG_10411
Uncharacterized protein.
 
 
  0.585
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.