STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10691Uncharacterized protein ZK512.5. (255 aa)    
Predicted Functional Partners:
EAG_15574
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.957
EAG_05897
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.924
EAG_02060
Protein transport protein Sec24B.
   
 0.922
EAG_09029
Protein transport protein Sec24C.
   
 0.910
EAG_10690
Protein transport protein Sec16A.
 
      0.885
EAG_04273
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.816
EAG_10689
Uncharacterized protein.
 
      0.785
EAG_16103
Dystrophin-like protein 1.
      
 0.695
EAG_05858
Syntaxin-5; Belongs to the syntaxin family.
   
 
 0.695
EAG_10687
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
     
 0.683
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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