STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10519Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (232 aa)    
Predicted Functional Partners:
EAG_15610
BET1-like protein.
    
 0.999
EAG_10298
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.999
EAG_05858
Syntaxin-5; Belongs to the syntaxin family.
    
 0.999
EAG_07799
Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family.
    
 0.998
EAG_07557
Sly1 protein-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.993
EAG_10687
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 
 0.993
EAG_02981
General vesicular transport factor p115.
    
 0.987
EAG_16316
Golgin subfamily A member 2.
    
 0.981
EAG_07022
Surfeit locus protein 4-like protein.
    
 
 0.964
EAG_11558
Syntaxin-12; Belongs to the syntaxin family.
    
 
 0.953
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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