STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10525D-arabinose 1-dehydrogenase. (335 aa)    
Predicted Functional Partners:
EAG_15574
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.740
EAG_11289
Nuclear pore complex protein Nup133.
   
 0.729
EAG_05078
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.716
EAG_10123
Gametogenetin-binding protein 2-like.
      
 0.693
EAG_03522
Nucleoporin SEH1-like; Belongs to the WD repeat SEC13 family.
    
 0.647
EAG_13437
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.642
EAG_08175
Alcohol dehydrogenase [NADP+].
  
 0.640
EAG_08179
Alcohol dehydrogenase [NADP+].
  
 0.640
EAG_01039
Aldose reductase.
  
 0.640
EAG_11020
N-acetylneuraminate lyase; Belongs to the DapA family.
  
 0.640
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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