STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_00931Retinoblastoma-binding protein 8. (244 aa)    
Predicted Functional Partners:
EAG_10803
Breast cancer type 1 susceptibility protein-like protein.
    
 0.870
EAG_12876
NIBRIN_BRCT_II domain-containing protein.
    
 0.823
EAG_11264
Ankyrin repeat domain-containing protein 12.
    
 0.810
EAG_04433
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.761
EAG_03182
DNA repair protein RAD50.
    
 0.738
EAG_07871
Exonuclease 1.
   
 0.693
EAG_05728
Mono-ADP-ribosyltransferase sirtuin-6.
     
 0.591
EAG_03464
DNA2-like helicase.
    
 0.556
EAG_01482
Bloom syndrome protein-like protein.
   
 0.556
EAG_15013
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
   
 
 0.556
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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