STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_07306Protein within the bgcn gene intron. (263 aa)    
Predicted Functional Partners:
EAG_14799
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.999
EAG_14119
Protein mago nashi.
    
 
 0.993
EAG_10509
Probable sulfite oxidase, mitochondrial; Belongs to the cytochrome b5 family.
      
 0.587
EAG_15699
Eukaryotic initiation factor 4A-III.
    
 
 0.587
EAG_13766
Uncharacterized protein C20orf4-like protein.
   
  
 0.562
EAG_10378
Translocation protein SEC63-like protein.
      
 0.538
EAG_02309
Regulator of nonsense transcripts 3B.
    
 
 0.510
EAG_06686
Eukaryotic translation initiation factor 2C 2.
      
 0.459
EAG_11742
Regulator of nonsense transcripts 2.
      
 0.447
EAG_10077
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.
      
 0.439
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.