EAG_02724 protein (Camponotus floridanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAG_02724

Ankyrin repeat and LEM domain-containing protein 2. (503 aa)

Predicted Functional Partners:

EAG_10863

0.848

EAG_05486

0.752

EAG_12895

0.752

EAG_13795

0.733

EAG_05921

0.711

EAG_08386

0.710

EAG_01401

0.674

EAG_09215

0.551

EAG_11400

0.528

EAG_10544

0.517

Your Current Organism:

Camponotus floridanus

NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAG_01401	EAG_02724	E2B048	E2AFM6	NAD-dependent deacetylase sirtuin-2.	Ankyrin repeat and LEM domain-containing protein 2.	0.674
EAG_02724	EAG_01401	E2AFM6	E2B048	Ankyrin repeat and LEM domain-containing protein 2.	NAD-dependent deacetylase sirtuin-2.	0.674
EAG_02724	EAG_05486	E2AFM6	E2ARE5	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein kinase VRK1.	0.752
EAG_02724	EAG_05921	E2AFM6	E2AY82	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein phosphatase.	0.711
EAG_02724	EAG_08386	E2AFM6	E1ZYP9	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.	0.710
EAG_02724	EAG_09215	E2AFM6	E2AKZ5	Ankyrin repeat and LEM domain-containing protein 2.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.551
EAG_02724	EAG_10544	E2AFM6	E2ARD1	Ankyrin repeat and LEM domain-containing protein 2.	Lethal(2) giant larvae protein-like protein 1.	0.517
EAG_02724	EAG_10863	E2AFM6	E2A9L1	Ankyrin repeat and LEM domain-containing protein 2.	Barrier-to-autointegration factor.	0.848
EAG_02724	EAG_11400	E2AFM6	E2A001	Ankyrin repeat and LEM domain-containing protein 2.	Ankyrin repeat and LEM domain-containing protein 1.	0.528
EAG_02724	EAG_12895	E2AFM6	E2ATS3	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein kinase VRK1.	0.752
EAG_02724	EAG_13795	E2AFM6	E2A3B9	Ankyrin repeat and LEM domain-containing protein 2.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.733
EAG_05486	EAG_02724	E2ARE5	E2AFM6	Serine/threonine-protein kinase VRK1.	Ankyrin repeat and LEM domain-containing protein 2.	0.752
EAG_05486	EAG_10863	E2ARE5	E2A9L1	Serine/threonine-protein kinase VRK1.	Barrier-to-autointegration factor.	0.695
EAG_05921	EAG_02724	E2AY82	E2AFM6	Serine/threonine-protein phosphatase.	Ankyrin repeat and LEM domain-containing protein 2.	0.711
EAG_05921	EAG_08386	E2AY82	E1ZYP9	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.	0.999
EAG_05921	EAG_09215	E2AY82	E2AKZ5	Serine/threonine-protein phosphatase.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.848
EAG_05921	EAG_13795	E2AY82	E2A3B9	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.999
EAG_08386	EAG_02724	E1ZYP9	E2AFM6	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.	Ankyrin repeat and LEM domain-containing protein 2.	0.710
EAG_08386	EAG_05921	E1ZYP9	E2AY82	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.	Serine/threonine-protein phosphatase.	0.999
EAG_08386	EAG_10863	E1ZYP9	E2A9L1	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.	Barrier-to-autointegration factor.	0.586