STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_00992Very low-density lipoprotein receptor. (1019 aa)    
Predicted Functional Partners:
EAG_05978
Protein disabled.
    
 0.642
EAG_12602
Low density lipoprotein receptor adapter protein 1.
    
 0.642
EAG_00653
Apolipophorins.
    
 0.603
EAG_06440
Axin.
    
 0.579
EAG_04626
Axin-1.
    
 0.579
EAG_05836
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.564
EAG_15842
EGF-like, fibronectin type-III and laminin G-like domain-containing protein.
    
 0.534
EAG_03251
Agrin.
    
 0.534
EAG_12406
Basement membrane-specific heparan sulfate proteoglycan core protein.
    
0.534
EAG_14380
Dual specificity protein phosphatase 3; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 0.523
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.