STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01861Probable GDP-L-fucose synthetase. (303 aa)    
Predicted Functional Partners:
EAG_11552
Probable GDP-mannose 4,6 dehydratase.
 0.979
EAG_11228
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
 
  
   0.895
EAG_14333
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.774
EAG_15516
40S ribosomal protein S3.
   
 0.754
EAG_09680
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.751
EAG_00722
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.748
EAG_03536
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.745
EAG_15314
40S ribosomal protein S4.
   
 0.741
EAG_15601
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.740
EAG_12488
40S ribosomal protein S10.
   
 0.733
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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