STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_03897Transmembrane channel-like protein 5. (496 aa)    
Predicted Functional Partners:
EAG_09215
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.570
EAG_06813
Ras GTPase-activating protein 1.
    
 
 0.497
EAG_07758
DnaJ-like protein subfamily C member 14.
      
 0.495
EAG_15575
Helicase SKI2W.
    
 
 0.479
EAG_14678
EF-hand domain-containing family member B.
    
 
 0.458
EAG_15178
Tyrosine-protein kinase-like 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.456
EAG_09220
CAAX prenyl protease 2.
      
 0.410
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.