STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_05175Protein suppressor of sable. (1189 aa)    
Predicted Functional Partners:
EAG_12946
Homeobox protein goosecoid.
    
   0.962
EAG_05084
Symplekin.
   
 0.961
EAG_12522
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.960
EAG_14066
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.960
EAG_12484
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.960
EAG_01833
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.959
EAG_12390
Protein suppressor of forked.
    
 0.958
EAG_05508
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.957
EAG_06466
Cleavage stimulation factor 50 kDa subunit.
    
 0.947
EAG_07336
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
    
 0.944
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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