STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_09666Ribonuclease P protein subunit p40. (360 aa)    
Predicted Functional Partners:
EAG_16190
Ribosomal_L7Ae domain-containing protein.
    
 0.675
EAG_09665
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
 
   
  0.653
EAG_13428
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.643
EAG_04432
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.525
EAG_00905
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
   
 
  0.514
EAG_06651
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
    
  0.489
EAG_10789
Ribonuclease P protein subunit p29.
    
 0.464
EAG_02875
Ribonuclease P protein component 4.
    
 0.424
EAG_03496
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
  0.404
EAG_01930
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
  0.404
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
Server load: low (16%) [HD]