STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_14489Alkylated DNA repair protein alkB-like protein 6. (229 aa)    
Predicted Functional Partners:
EAG_04133
Alkylated DNA repair protein alkB-like protein 7.
   
  
 0.712
EAG_14653
Mediator of RNA polymerase II transcription subunit 29.
    
 
 0.683
EAG_14857
Mediator of RNA polymerase II transcription subunit 28.
 
      0.668
EAG_14740
Alkylated DNA repair protein alkB-like protein 4.
      
 0.588
EAG_14004
Ras suppressor protein 1.
      
 0.583
EAG_14856
Cytosol aminopeptidase.
 
      0.568
EAG_12874
Uncharacterized protein C11orf2.
      
 0.522
EAG_11438
JmjC domain-containing protein 4.
      
 0.495
EAG_16072
RING finger protein 121.
      
 0.456
EAG_13148
Alkylated DNA repair protein alkB-like protein 8.
   
  
0.412
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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