STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_11577Ubiquitin carboxyl-terminal hydrolase. (507 aa)    
Predicted Functional Partners:
EAG_11522
Ataxin-7-like protein 1.
    
 0.997
EAG_09988
SAGA-associated factor 29-like protein.
   
 0.995
EAG_02211
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.994
EAG_02271
Transcriptional adapter 3-like.
    
 0.991
EAG_03010
Transcription initiation factor TFIID subunit 10.
    
 0.991
EAG_02598
Transcription initiation factor TFIID subunit 9.
    
 0.988
EAG_09415
Transcription initiation protein SPT3-like protein.
    
 0.985
EAG_15856
Transcriptional adapter 2B.
    
 0.984
EAG_06513
Transcription initiation factor TFIID subunit 12.
    
 0.975
Sgf11
SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
    
 0.969
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.