STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10104F-box/LRR-repeat protein 4. (651 aa)    
Predicted Functional Partners:
EAG_10573
Cullin-1; Belongs to the cullin family.
    
 0.758
e(y)2
Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.671
EAG_03459
Cullin-associated NEDD8-dissociated protein 1.
    
 0.643
EAG_05104
COMM domain-containing protein 4.
    
 0.615
EAG_04837
RING-box protein 1A.
    
 0.612
EAG_04579
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.606
EAG_04581
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.606
EAG_10282
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.606
EAG_11229
Cullin-3; Belongs to the cullin family.
    
 0.601
EAG_07382
NEDD8-activating enzyme E1 catalytic subunit.
     
 0.583
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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