STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10114H/ACA ribonucleoprotein complex subunit 4. (514 aa)    
Predicted Functional Partners:
EAG_05473
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.999
EAG_04508
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.999
EAG_13219
Protein SHQ1-like protein.
   
 0.999
EAG_04999
Nucleolar protein 5A.
   
 
 0.999
EAG_11801
H/ACA ribonucleoprotein complex subunit 2-like protein.
  
 0.999
EAG_04350
Nucleolar protein 5.
  
 
 0.999
EAG_11238
H/ACA ribonucleoprotein complex subunit 3.
   
 0.998
EAG_03477
RNA helicase.
  
 
 0.993
EAG_06661
H/ACA ribonucleoprotein complex non-core subunit NAF1.
   
 
 0.991
EAG_05662
WD repeat-containing protein 79.
    
 0.988
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.