STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_09296Programmed cell death protein 5. (129 aa)    
Predicted Functional Partners:
EAG_05499
Uncharacterized protein.
   
    0.957
EAG_03536
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
    0.946
EAG_14981
60S ribosomal protein L30.
   
    0.920
EAG_16317
60S ribosomal protein L35.
   
    0.896
EAG_02204
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
  
 0.879
EAG_15516
40S ribosomal protein S3.
   
    0.875
EAG_06112
60S ribosomal protein L34.
   
    0.874
EAG_15314
40S ribosomal protein S4.
   
    0.868
EAG_04332
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
    0.867
EAG_12153
Prefoldin subunit 1.
   
    0.861
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.