STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01575Zinc finger protein ubi-d4 A. (528 aa)    
Predicted Functional Partners:
EAG_06823
SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member 1.
   
 
 0.863
EAG_03665
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 
 0.832
EAG_01595
Trithorax group protein osa.
    
 
 0.812
EAG_06039
AT-rich interactive domain-containing protein 2.
    
 
 0.794
EAG_13211
Protein polybromo-1.
    
 
 0.793
EAG_05167
SWI/SNF complex subunit SMARCC2.
    
 
 0.793
EAG_01504
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
   
 
 0.783
EAG_08658
Bromodomain-containing protein 7.
    
 
 0.708
EAG_02971
SSXT protein.
    
 
 0.690
EAG_03562
MATH domain-containing protein.
   
 
 0.632
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.