STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01633Peptidylprolyl isomerase. (316 aa)    
Predicted Functional Partners:
EAG_04350
Nucleolar protein 5.
   
 
 0.965
EAG_02426
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.949
EAG_10114
H/ACA ribonucleoprotein complex subunit 4.
   
   0.937
EAG_14545
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
   0.878
EAG_11801
H/ACA ribonucleoprotein complex subunit 2-like protein.
   
   0.877
EAG_15655
WD repeat-containing protein 74.
   
   0.862
EAG_11997
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.840
EAG_02502
E3 ubiquitin-protein ligase MARCH6.
    
 
 0.830
EAG_03477
RNA helicase.
   
 
 0.807
EAG_02604
Brix domain-containing protein 1-like protein.
   
 
 0.798
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.