STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01747Spectrin alpha chain. (2418 aa)    
Predicted Functional Partners:
EAG_00864
Myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
  0.933
EAG_15205
Spectrin beta chain.
 
 
 0.914
EAG_06197
N-glycosylase/DNA lyase.
 
      0.895
EAG_15207
Spectrin beta chain; Belongs to the spectrin family.
   
0.890
EAG_14487
Spectrin beta chain, brain 4.
   
0.883
EAG_03706
Bullous pemphigoid antigen 1, isoforms 6/9/10.
   
0.656
EAG_15112
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
    
  0.623
EAG_13144
Transmembrane emp24 domain-containing protein 7.
     
 0.622
EAG_09215
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.622
EAG_09038
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
     
 0.620
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.