STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_14348Poly(A)-specific ribonuclease PARN. (571 aa)    
Predicted Functional Partners:
EAG_14950
mRNA-decapping enzyme 2.
     
 0.646
EAG_16078
Far upstream element-binding protein 1.
    
 0.465
EAG_02091
Probable phospholipase D family member FLJ33580-like protein.
      
 0.451
EAG_13852
Cytoplasmic polyadenylation element-binding protein 1-B.
    
 
 0.441
EAG_05084
Symplekin.
    
 
 0.437
EAG_14259
Exosome complex exonuclease RRP46.
     
 0.435
EAG_04679
CCR4-NOT transcription complex subunit 1.
      
 0.422
EAG_09053
Exosome complex exonuclease MTR3.
     
 0.421
EAG_11234
Poly(A) RNA polymerase gld-2-like protein A.
      
 0.416
EAG_00788
Exosome complex exonuclease RRP41.
     
 0.411
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.