STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_02238tRNA-dihydrouridine synthase 4-like. (748 aa)    
Predicted Functional Partners:
EAG_09047
Bifunctional aminoacyl-tRNA synthetase.
  
 
 0.745
EAG_14988
Probable ribosome biogenesis protein EAG_14988; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.612
EAG_08042
tRNA guanosine-2'-O-methyltransferase TRM11-like protein.
   
  
 0.603
EAG_13825
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.567
EAG_03943
Conserved oligomeric Golgi complex subunit 5.
   
  
 0.538
EAG_07224
RNA (Guanine-9-)-methyltransferase domain-containing protein 2.
   
  
 0.537
EAG_05632
DTW domain-containing protein 1.
      
 0.504
EAG_02301
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
      
 0.504
EAG_06009
WD repeat-containing protein 6.
   
  
 0.500
EAG_03546
B-cell receptor-associated protein 31.
 
    
 0.497
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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