EAG_00615 protein (Camponotus floridanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAG_00615

Ras-specific guanine nucleotide-releasing factor 1. (376 aa)

Predicted Functional Partners:

EAG_10869

0.872

EAG_10991

0.509

EAG_12183

0.506

EAG_14096

0.500

EAG_02540

0.481

EAG_06066

0.477

EAG_09215

0.451

EAG_08824

0.428

EAG_06814

0.416

EAG_16438

0.416

Your Current Organism:

Camponotus floridanus

NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAG_00615	EAG_02540	E2B0Z3	E2ANH4	Ras-specific guanine nucleotide-releasing factor 1.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.481
EAG_00615	EAG_06066	E2B0Z3	E2AKA8	Ras-specific guanine nucleotide-releasing factor 1.	Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.477
EAG_00615	EAG_06814	E2B0Z3	E2A1F7	Ras-specific guanine nucleotide-releasing factor 1.	Ras-like protein 1.	0.416
EAG_00615	EAG_08824	E2B0Z3	E2A9W3	Ras-specific guanine nucleotide-releasing factor 1.	Ras-like GTP-binding protein Rho1.	0.428
EAG_00615	EAG_09215	E2B0Z3	E2AKZ5	Ras-specific guanine nucleotide-releasing factor 1.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.451
EAG_00615	EAG_10869	E2B0Z3	E2AT72	Ras-specific guanine nucleotide-releasing factor 1.	Protein son of sevenless.	0.872
EAG_00615	EAG_10991	E2B0Z3	E2AJ57	Ras-specific guanine nucleotide-releasing factor 1.	Adapter molecule Crk.	0.509
EAG_00615	EAG_12183	E2B0Z3	E2AZY6	Ras-specific guanine nucleotide-releasing factor 1.	Receptor protein-tyrosine kinase.	0.506
EAG_00615	EAG_14096	E2B0Z3	E1ZX94	Ras-specific guanine nucleotide-releasing factor 1.	SHC-transforming protein 1.	0.500
EAG_00615	EAG_16438	E2B0Z3	E2ASR3	Ras-specific guanine nucleotide-releasing factor 1.	Cold shock domain-containing protein E1.	0.416
EAG_02540	EAG_00615	E2ANH4	E2B0Z3	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Ras-specific guanine nucleotide-releasing factor 1.	0.481
EAG_02540	EAG_06066	E2ANH4	E2AKA8	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.702
EAG_02540	EAG_06814	E2ANH4	E2A1F7	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Ras-like protein 1.	0.638
EAG_02540	EAG_09215	E2ANH4	E2AKZ5	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.546
EAG_02540	EAG_10869	E2ANH4	E2AT72	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Protein son of sevenless.	0.589
EAG_02540	EAG_12183	E2ANH4	E2AZY6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Receptor protein-tyrosine kinase.	0.934
EAG_02540	EAG_14096	E2ANH4	E1ZX94	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	SHC-transforming protein 1.	0.785
EAG_02540	EAG_16438	E2ANH4	E2ASR3	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Cold shock domain-containing protein E1.	0.579
EAG_06066	EAG_00615	E2AKA8	E2B0Z3	Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Ras-specific guanine nucleotide-releasing factor 1.	0.477
EAG_06066	EAG_02540	E2AKA8	E2ANH4	Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.702