STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_15104Vesicle transport protein SEC20. (112 aa)    
Predicted Functional Partners:
EAG_02411
Vesicle transport protein USE1.
    
 0.999
EAG_10687
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.997
EAG_02521
RAD50-interacting protein 1.
    
 0.996
EAG_02819
Syntaxin-18.
   
 0.990
EAG_12150
Vesicle-fusing ATPase 1.
    
 0.829
EAG_09038
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
     
 0.788
EAG_08249
Centromere/kinetochore protein zw10-like protein.
    
 0.774
EAG_15821
Neuroblastoma-amplified gene protein.
    
 0.769
EAG_11270
Soluble NSF attachment protein.
    
 0.741
EAG_10298
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
  
 0.693
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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