STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_02123Retinoic acid-induced protein 1. (1434 aa)    
Predicted Functional Partners:
EAG_02840
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.644
EAG_04515
Retinoblastoma-binding protein 5.
    
 0.615
EAG_04206
WD repeat-containing protein 85.
      
 0.548
EAG_08233
CREB-binding protein.
   
 0.534
EAG_10442
Myotubularin-related protein 13.
    
 
 0.491
EAG_13352
Peregrin.
   
 
 0.481
EAG_02505
Uncharacterized protein.
 
      0.433
EAG_02130
Methyltransferase-like protein 9.
 
      0.433
EAG_02127
UPF0363 protein C7orf20.
 
      0.431
EAG_09814
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.423
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.