Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_02319 | OBRU01_09023 | A0A0L7LSL5 | A0A0L7LGM4 | Protein kinase domain-containing protein. | Peripheral plasma membrane protein. | 0.998 |
OBRU01_02319 | OBRU01_26115 | A0A0L7LSL5 | A0A0L7K3E0 | Protein kinase domain-containing protein. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.659 |
OBRU01_02665 | OBRU01_09453 | A0A0L7LSY4 | A0A0L7LG86 | 40S ribosomal protein S6. | Nop5. | 0.997 |
OBRU01_02665 | OBRU01_11275 | A0A0L7LSY4 | A0A0L7L7D7 | 40S ribosomal protein S6. | Small subunit processome component 20-like protein. | 0.996 |
OBRU01_02665 | OBRU01_23036 | A0A0L7LSY4 | A0A0L7KPJ4 | 40S ribosomal protein S6. | WD_REPEATS_REGION domain-containing protein. | 0.996 |
OBRU01_02665 | OBRU01_23179 | A0A0L7LSY4 | A0A0L7KN25 | 40S ribosomal protein S6. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.996 |
OBRU01_02665 | OBRU01_24077 | A0A0L7LSY4 | A0A0L7KN89 | 40S ribosomal protein S6. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.999 |
OBRU01_02665 | OBRU01_26115 | A0A0L7LSY4 | A0A0L7K3E0 | 40S ribosomal protein S6. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.664 |
OBRU01_09023 | OBRU01_02319 | A0A0L7LGM4 | A0A0L7LSL5 | Peripheral plasma membrane protein. | Protein kinase domain-containing protein. | 0.998 |
OBRU01_09023 | OBRU01_26115 | A0A0L7LGM4 | A0A0L7K3E0 | Peripheral plasma membrane protein. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.659 |
OBRU01_09453 | OBRU01_02665 | A0A0L7LG86 | A0A0L7LSY4 | Nop5. | 40S ribosomal protein S6. | 0.997 |
OBRU01_09453 | OBRU01_11275 | A0A0L7LG86 | A0A0L7L7D7 | Nop5. | Small subunit processome component 20-like protein. | 0.998 |
OBRU01_09453 | OBRU01_23036 | A0A0L7LG86 | A0A0L7KPJ4 | Nop5. | WD_REPEATS_REGION domain-containing protein. | 0.992 |
OBRU01_09453 | OBRU01_23179 | A0A0L7LG86 | A0A0L7KN25 | Nop5. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.997 |
OBRU01_09453 | OBRU01_24077 | A0A0L7LG86 | A0A0L7KN89 | Nop5. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.996 |
OBRU01_09453 | OBRU01_26115 | A0A0L7LG86 | A0A0L7K3E0 | Nop5. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.659 |
OBRU01_10532 | OBRU01_14824 | A0A0L7L7F2 | A0A0L7L623 | Uncharacterized protein. | Cytochrome b5 reductase 4. | 0.735 |
OBRU01_10532 | OBRU01_23179 | A0A0L7L7F2 | A0A0L7KN25 | Uncharacterized protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.527 |
OBRU01_10532 | OBRU01_26115 | A0A0L7L7F2 | A0A0L7K3E0 | Uncharacterized protein. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.744 |
OBRU01_11275 | OBRU01_02665 | A0A0L7L7D7 | A0A0L7LSY4 | Small subunit processome component 20-like protein. | 40S ribosomal protein S6. | 0.996 |
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