STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_23893Ubiquitin fusion degradation protein 1-like protein. (154 aa)    
Predicted Functional Partners:
OBRU01_06512
Branched-chain-amino-acid aminotransferase.
    
 0.858
OBRU01_22239
2-hydroxyphytanoyl-CoA lyase.
    
 0.830
OBRU01_04873
Translation elongation factor 2.
   
 0.801
OBRU01_24022
UbiA prenyltransferase domain-containing protein.
    
  0.791
OBRU01_06752
Cell differentiation protein.
    
 
 0.770
OBRU01_09130
Adenine phosphoribosyl transferase.
  
 
 0.767
OBRU01_01826
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
 
 0.750
OBRU01_14542
Putative threonine dehydratase catabolic.
  
 0.741
OBRU01_17308
Putative threonine dehydratase catabolic.
  
 0.741
OBRU01_15002
PALP domain-containing protein.
  
 0.741
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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