STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_24416Peroxisomal membrane protein PEX16. (327 aa)    
Predicted Functional Partners:
OBRU01_05627
Peroxisomal biogenesis factor 3.
    
 0.923
OBRU01_20462
Peroxisomal membrane anchor protein.
    
 0.892
OBRU01_10544
Putative peroxisome assembly protein 12.
     
 0.877
OBRU01_22665
Exotoxin.
     
 0.874
OBRU01_10112
Peroxisomal membrane protein.
     
 0.870
OBRU01_18183
Putative Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.868
OBRU01_02226
DUF4097 domain-containing protein.
    
 0.854
OBRU01_07595
Peroxisomal membrane protein.
     
 0.840
OBRU01_27254
Putative tetratricopeptide repeat protein.
     
 0.828
OBRU01_06119
Putative tetratricopeptide repeat protein.
     
 0.828
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.