STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_23013Nucleosome assembly protein. (106 aa)    
Predicted Functional Partners:
OBRU01_03005
Histone H2A; Belongs to the histone H2A family.
   
 
 0.967
OBRU01_14711
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
    
 
 0.934
OBRU01_13383
Protein kinase domain-containing protein.
    
 
 0.932
OBRU01_02665
40S ribosomal protein S6.
   
 
 0.870
OBRU01_22247
60S ribosomal protein L39.
   
 
 0.857
OBRU01_20004
Shaggy.
    
   0.840
OBRU01_25663
Putative histone cluster 3, H2bb; Belongs to the histone H2B family.
    
 
 0.762
OBRU01_25739
Histone H2B; Belongs to the histone H2B family.
    
 
 0.762
OBRU01_11819
Putative histone cluster 3, H2bb; Belongs to the histone H2B family.
    
 
 0.762
OBRU01_24501
Histone H1.
    
 
 0.756
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.