STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_23127Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
OBRU01_04255
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.769
OBRU01_15920
Putative DNA ligase IV.
    
 0.664
OBRU01_08939
Putative Chromodomain helicase-DNA-binding protein Mi-2-like protein.
    
 0.660
OBRU01_02698
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.649
OBRU01_18632
Putative Helicase.
    
  0.648
OBRU01_16685
Ubiquitin/40S ribosomal protein S27a fusion protein.
    
  0.645
OBRU01_14363
General transcription factor 3C polypeptide 5.
    
 0.643
OBRU01_09110
Putative BRCA1-associated RING domain protein.
    
 0.642
OBRU01_09423
Putative mitochondrial ribosomal protein.
    
  0.641
OBRU01_14862
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
  0.638
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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