STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_22691Putative N-acetyl neuraminate lyase. (113 aa)    
Predicted Functional Partners:
OBRU01_05454
Putative mandelate racemase.
     
 0.850
OBRU01_14030
Dihydrofolate reductase.
  
 
 0.844
OBRU01_10532
Uncharacterized protein.
   
 
 0.826
OBRU01_00926
Serine--pyruvate aminotransferase.
  
 
 0.821
OBRU01_21571
Aspartate aminotransferase.
  
 0.806
OBRU01_04932
D-amino acid oxidase.
  
 
 0.796
OBRU01_11213
Hydroxyacid oxidase.
  
 
 0.794
OBRU01_18671
Aspartate aminotransferase.
  
  0.785
OBRU01_11209
Gamma-glutamylcysteine ligase.
    
 0.775
OBRU01_07518
Sialic acid synthase.
    
 0.775
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.