STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_21301TRAF-type zinc finger domain containing 1. (236 aa)    
Predicted Functional Partners:
OBRU01_04255
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.957
OBRU01_12400
NF-kappa-B inhibitor-like protein 2.
    
 0.857
OBRU01_17623
PDZ domain-containing protein.
   
 0.850
OBRU01_22115
Putative WW, C2 and coiled-coil domain containing 1.
    
 0.844
OBRU01_01538
E3 ubiquitin-protein ligase mind-bomb.
    
 0.835
OBRU01_01537
Putative mind bomb.
    
 0.835
OBRU01_11279
Epsin 4/enthoprotin.
    
 0.828
OBRU01_11280
Liquid facets-Related.
    
 0.828
OBRU01_22271
Apaf-1S.
    
 0.821
OBRU01_24689
MAP kinse-ERK kinase.
    
 0.810
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.