STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_18600ABC transporter, solute-binding protein. (183 aa)    
Predicted Functional Partners:
OBRU01_05798
Uncharacterized protein.
    
 0.760
OBRU01_05664
Latrophilin-like receptor.
    
  0.681
OBRU01_26188
Uncharacterized protein.
    
  0.666
OBRU01_01446
Crumbs.
    
  0.666
OBRU01_16153
Serine/threonine protein kinase.
    
  0.657
OBRU01_04255
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.638
OBRU01_10602
Lysyl oxidase-like protein 4.
    
 0.628
OBRU01_22813
Htra2.
   
  0.624
OBRU01_18506
Uncharacterized protein.
    
  0.622
OBRU01_20316
Uncharacterized protein.
    
  0.622
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.